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1NW6

Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to sinefungin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths70.428, 130.070, 67.216
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.000

*

- 1.940
R-factor0.22
Rwork0.220
R-free0.25000

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1eg2
RMSD bond length0.007
RMSD bond angle1.200
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.0002.010
High resolution limit [Å]1.9401.940
Rmerge0.038

*

0.167

*

Total number of observations78952

*

Number of reflections232682292

*

<I/σ(I)>22.56.5
Completeness [%]99.899.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

7.4298lithium sulfate, HEPES, pH 7.4, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein2.0 (mg/ml)
21reservoirsinefungin1-20 (mM)
31reservoirHEPES100 (mM)pH7.4
41reservoir1.5 (M)

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PDB entries from 2024-07-17

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