Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1NQV

Crystal Structure of Lumazine Synthase from Aquifex aeolicus in Complex with Inhibitor: 5-nitroso-6-ribityl-amino-2,4(1H,3H)pyrimidinedione

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE X11
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineX11
Temperature [K]100
Detector technologyCCD
Collection date2001-06-08
DetectorMARRESEARCH
Wavelength(s)0.84820
Spacegroup nameI 2 3
Unit cell lengths180.118, 180.118, 180.118
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.140 - 2.050
R-factor0.155
Rwork0.155
R-free0.18100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.020

*

RMSD bond angle1.800

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.1402.090
High resolution limit [Å]2.0502.050
Rmerge0.087

*

0.297

*

Total number of observations480544

*

Number of reflections60538

*

Completeness [%]99.4

*

100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7

*

293sodium-potassium tartrate, HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirEDTA0.5 (mM)
31reservoirsodium sulfite0.5 (mM)
41reservoirpotassium phosphate50 (mM)pH7.0

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon