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1NN0

Crystal structure of human thymidylate kinase with ddTMP and ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID2
Synchrotron siteESRF
BeamlineID2
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)0.9887
Spacegroup nameP 43 21 2
Unit cell lengths100.535, 100.535, 49.963
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution70.700

*

- 1.600
Rwork0.211
R-free0.26500
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.014

*

RMSD bond angle1.700

*

Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]70.7001.600
High resolution limit [Å]1.5501.550
Rmerge0.0730.364

*

Total number of observations119378

*

Number of reflections35723
<I/σ(I)>7.241.32
Completeness [%]94.7

*

96.4
Redundancy3.32.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP829315-20% PEG 3350, 100 mM Tris/HCl, pH 8.0, 5% filtered dead sea water, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein2 (mM)
21dropADP2 (mM)

218500

PDB entries from 2024-04-17

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