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1NLY

Crystal structure of the traffic ATPase of the Helicobacter pylori type IV secretion system in complex with ATPgammaS

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Wavelength(s)0.9793
Spacegroup nameP 63 2 2
Unit cell lengths110.820, 110.820, 230.910
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000

*

- 2.800
Rwork0.243
R-free0.30400
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.012
RMSD bond angle1.430

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.8002.800

*

Rmerge0.095

*

0.378

*

Total number of observations110109

*

Number of reflections21297

*

Completeness [%]99.1

*

99.7

*

Redundancy5.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

7.8298Ammonium sulfate, PEG 400, Tris-HCl, pH 7.8, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate2 (M)
21reservoirPEG4002 (%)
31reservoirTris-HCl100 (mM)pH7.8

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PDB entries from 2024-04-24

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