1NC3
Crystal structure of E. coli MTA/AdoHcy nucleosidase complexed with formycin A (FMA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2001-01-12 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.100, 69.700, 127.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 * - 2.200 |
Rwork | 0.198 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code: 1JYS |
RMSD bond length | 0.012 |
RMSD bond angle | 23.300 * |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 * | 2.340 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.077 * | 0.261 * |
Total number of observations | 170060 * | |
Number of reflections | 29777 * | |
Completeness [%] | 99.8 * | 99.5 * |
Redundancy | 5.7 * | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.7 | 293 | PEG 200, sodium acetate, sodium chloride, cobalt chloride, pH 4.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG200 | 37 (%(w/v)) | |
2 | 1 | reservoir | sodium acetate | 100 (mM) | pH4.7 |
3 | 1 | reservoir | 100 (mM) | ||
4 | 1 | reservoir | 8.0 (mM) | ||
5 | 1 | drop | protein | 15 (mg/ml) | |
6 | 1 | drop | FMA | 1 (mM) | or 1mM MTT |