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1N59

Crystal structure of the Murine class I Major Histocompatibility Complex of H-2KB, B2-Microglobulin, and A 9-Residue immunodominant peptide epitope gp33 derived from LCMV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX II BEAMLINE I711
Synchrotron siteMAX II
BeamlineI711
Temperature [K]120
Detector technologyIMAGE PLATE
Collection date2000-06-03
DetectorMARRESEARCH
Wavelength(s)1.018
Spacegroup nameP 1 21 1
Unit cell lengths50.551, 88.574, 120.090
Unit cell angles90.00, 93.72, 90.00
Refinement procedure
Resolution20.000

*

- 2.950
R-factor0.23195
Rwork0.229
R-free0.28600

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1osz
RMSD bond length0.018
RMSD bond angle1.890

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.950
High resolution limit [Å]2.950

*

2.950

*

Rmerge0.130

*

0.242

*

Total number of observations46919

*

Number of reflections20422

*

<I/σ(I)>8.43.5
Completeness [%]86.8

*

62.2
Redundancy2.32.06
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7298PEG8000, magnesium acetate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium potassium phosphate1.85 (M)
21reservoirMPD1 (%)
31dropprotein5 (mg/ml)
41dropTris-Cl20 (mM)pH7.0

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PDB entries from 2025-06-11

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