1N26
Crystal Structure of the extra-cellular domains of Human Interleukin-6 Receptor alpha chain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | MACSCIENCE |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS II |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 51.130, 51.130, 303.388 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 2.400 |
R-factor | 0.22 |
Rwork | 0.220 |
R-free | 0.29000 |
Structure solution method | MIR |
Starting model (for MR) | ab initio built into MIR map |
RMSD bond length | 0.015 |
RMSD bond angle | 1.960 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.400 |
High resolution limit [Å] | 2.400 | 2.350 |
Rmerge | 0.110 | 0.570 |
<I/σ(I)> | 39 | 3.7 |
Completeness [%] | 99.4 | 100 |
Redundancy | 18.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 300 | ammonium sulphate, PEG 3350, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 300 | ammonium sulphate, PEG 3350, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 300 | ammonium sulphate, PEG 3350, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 300 | ammonium sulphate, PEG 3350, sodium citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 300K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 5 (mM) | pH8.0 |
3 | 1 | reservoir | ammonium sulfate | 50 (mM) | |
4 | 1 | reservoir | PEG3350 | 18 (%) | |
5 | 1 | reservoir | sodium citrate | 2.5 (mM) | pH5.6 |