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1MK1

Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]90
Detector technologyIMAGE PLATE
Collection date2001-12-19
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameP 61 2 2
Unit cell lengths64.088, 64.088, 182.393
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 2.000
Rwork0.209
R-free0.25900

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Structure solution methodMIR
RMSD bond length0.007
RMSD bond angle1.440
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.054

*

Total number of observations97257

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Number of reflections14597
<I/σ(I)>19.85.86
Completeness [%]92.4

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91.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5

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298Sodium formate, Tris HCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein7 (mg/ml)
21dropTris-HCl50 (mM)pH7.5
31dropEDTA1 (mM)
41reservoirsodium formate4.3 (M)
51reservoirTris100 (mM)pH8.0

247947

PDB entries from 2026-01-21

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