1MH0
Crystal structure of the anticoagulant slow form of thrombin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-03-23 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.978 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.530, 72.890, 161.490 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 * - 2.800 |
R-factor | 0.2191 |
Rwork | 0.219 |
R-free | 0.27500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ppb |
RMSD bond length | 0.008 |
RMSD bond angle | 24.500 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | |
High resolution limit [Å] | 2.800 | |
Rmerge | 0.111 * | 0.453 * |
Total number of observations | 70807 * | |
Number of reflections | 16577 | |
Completeness [%] | 90.9 | 78 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.4 * | 25 * | PEG 2000-Monomethyl ether, Tris-Cl, pH 7.6, VAPOR DIFFUSION, HANGING DROP at 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | mutant | 5.6 (mg/ml) | |
2 | 1 | drop | choline chloride | 50 (mM) | |
3 | 1 | drop | Tris | 20 (mM) | pH7.4 |
4 | 1 | reservoir | PEG2000 MME | 14 (%) | |
5 | 1 | reservoir | Tris | 0.1 (M) | pH7.6 |