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1MDX

Crystal structure of ArnB transferase with pyridoxal 5' phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Spacegroup nameP 43 21 2
Unit cell lengths91.152, 91.152, 128.683
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.580 - 1.960
R-factor0.207

*

Rwork0.198
R-free0.24100
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.011

*

RMSD bond angle1.760

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.600

*

2.070
High resolution limit [Å]1.9601.960
Rmerge0.153

*

0.805

*

Total number of observations537578

*

Number of reflections39164
Completeness [%]99.294.9

*

Redundancy13.7

*

9.3

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.520

*

sodium citrate, PEG 10000, beta-mercaptoethanol, pH 5.5, VAPOR DIFFUSION, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein12 (mg/ml)
21reservoirsodium citrate100 (mM)pH5.5
31reservoirPEG1000018-22 (%)
41reservoirbeta-mercaptoethanol1 (mM)

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PDB entries from 2024-07-17

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