1M6B
Structure of the HER3 (ERBB3) Extracellular Domain
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Detector technology | CCD |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 236.260, 49.620, 190.860 |
Unit cell angles | 90.00, 125.56, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.600 |
R-factor | 0.2381 |
Rwork | 0.235 |
R-free | 0.29400 * |
Structure solution method | MAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.590 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | REFMAC (5.1.19) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 * | |
High resolution limit [Å] | 2.600 | |
Rmerge | 0.067 * | 0.521 * |
Number of reflections | 48669 | |
Completeness [%] | 96.3 * | 79.2 * |
Redundancy | 3.0 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | pH 9.0, VAPOR DIFFUSION, HANGING DROP at 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 4 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 15-20 (%) | |
3 | 1 | reservoir | Tris | 0.1 (M) | pH9.0 |
4 | 1 | reservoir | lithium sulfate | 0.15 (M) |