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1M3U

Crystal Structure of Ketopantoate Hydroxymethyltransferase complexed the Product Ketopantoate

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date1999-08-26
DetectorSBC-2
Wavelength(s)0.97927, 0.9393, 0.979
Spacegroup nameP 1 21 1
Unit cell lengths86.074, 157.170, 100.181
Unit cell angles90.00, 97.44, 90.00
Refinement procedure
Resolution100.000 - 1.800
R-factor0.15276
Rwork0.152
R-free0.19600

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Structure solution methodMAD
Starting model (for MR)Initial C-alpha trace obtained from 3.0 A selenomethionine MAD-phased maps of a different crystal form: P21 cell=(87.8 155.4 209.9 90 99.3 90)
RMSD bond length0.017
RMSD bond angle1.560

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Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSnB
Refinement softwareREFMAC (5.1.19)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.0001.900
High resolution limit [Å]1.8001.800
Rmerge0.093

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0.620

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Number of reflections229086
<I/σ(I)>12.92.4
Completeness [%]94.0

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75
Redundancy4.53.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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7.4

*

4

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PEG 8000, sodium chloride, sodium acetate, sodium citrate buffer, pH 6.8, VAPOR DIFFUSION, temperature 277K
1Vapor diffusion, hanging drop

*

7.4

*

4

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PEG 8000, sodium chloride, sodium acetate, sodium citrate buffer, pH 6.8, VAPOR DIFFUSION, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG80009-11 (%(v/v))
21reservoir100-200 (mM)
31reservoirsodium acetate50-100 (mM)
41reservoirsodium citrate50 (mM)pH6.8
51dropprotein24-32 (mg/ml)
61dropketo-pantoate40 (mM)
71dropHEPES50 (mM)pH7.4

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PDB entries from 2025-06-04

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