1M3U
Crystal Structure of Ketopantoate Hydroxymethyltransferase complexed the Product Ketopantoate
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-08-26 |
Detector | SBC-2 |
Wavelength(s) | 0.97927, 0.9393, 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.074, 157.170, 100.181 |
Unit cell angles | 90.00, 97.44, 90.00 |
Refinement procedure
Resolution | 100.000 - 1.800 |
R-factor | 0.15276 |
Rwork | 0.152 |
R-free | 0.19600 * |
Structure solution method | MAD |
Starting model (for MR) | Initial C-alpha trace obtained from 3.0 A selenomethionine MAD-phased maps of a different crystal form: P21 cell=(87.8 155.4 209.9 90 99.3 90) |
RMSD bond length | 0.017 |
RMSD bond angle | 1.560 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SnB |
Refinement software | REFMAC (5.1.19) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.093 * | 0.620 * |
Number of reflections | 229086 | |
<I/σ(I)> | 12.9 | 2.4 |
Completeness [%] | 94.0 * | 75 |
Redundancy | 4.5 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.4 * | 4 * | PEG 8000, sodium chloride, sodium acetate, sodium citrate buffer, pH 6.8, VAPOR DIFFUSION, temperature 277K |
1 | Vapor diffusion, hanging drop * | 7.4 * | 4 * | PEG 8000, sodium chloride, sodium acetate, sodium citrate buffer, pH 6.8, VAPOR DIFFUSION, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG8000 | 9-11 (%(v/v)) | |
2 | 1 | reservoir | 100-200 (mM) | ||
3 | 1 | reservoir | sodium acetate | 50-100 (mM) | |
4 | 1 | reservoir | sodium citrate | 50 (mM) | pH6.8 |
5 | 1 | drop | protein | 24-32 (mg/ml) | |
6 | 1 | drop | keto-pantoate | 40 (mM) | |
7 | 1 | drop | HEPES | 50 (mM) | pH7.4 |