Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1LV0

Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]98
Detector technologyCCD
Collection date2000-02-12
DetectorADSC QUANTUM 4
Wavelength(s)1.033
Spacegroup nameP 1 21 1
Unit cell lengths62.230, 42.861, 89.104
Unit cell angles90.00, 103.53, 90.00
Refinement procedure
Resolution20.000

*

- 2.000
R-factor0.196
Rwork0.196
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1d5t
RMSD bond length0.005

*

RMSD bond angle23.800

*

Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.030
High resolution limit [Å]2.0002.000
Rmerge0.0610.419
Total number of observations68840

*

Number of reflections30213
<I/σ(I)>12.71.4
Completeness [%]95.785.9
Redundancy2.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.25

*

22.5

*

Luan, P., (2000) Traffic, 1, 270., Schalk, I., (1996) Nature,381, 42.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate1.73 (M)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon