1LRW
Crystal structure of methanol dehydrogenase from P. denitrificans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Temperature [K] | 277 |
Detector technology | AREA DETECTOR |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 113.340, 122.280, 107.360 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.490* |
R-factor | 0.179 |
Rwork | 0.179 |
R-free | 0.23800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ID 4AAH |
RMSD bond length | 0.006 |
RMSD bond angle | 1.380 * |
Phasing software | MERLOT |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.680 |
High resolution limit [Å] | 2.490 | 2.490 |
Rmerge | 0.093 * | 0.262 * |
Total number of observations | 317794 * | |
Number of reflections | 49524 | |
<I/σ(I)> | 13.9 | 1.9 |
Completeness [%] | 93.8 | 70.1 * |
Redundancy | 6.4 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 8.5 * | 293 | PEG 3350, Tris-HCl, Li2SO4, pH 8.3, seeding, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | enzyme | 20 (mg/ml) | |
2 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.5 |
3 | 1 | reservoir | PEG4000 | 30 (%) | |
4 | 1 | reservoir | 0.2 (M) |