1LD7
Co-crystal structure of Human Farnesyltransferase with farnesyldiphosphate and inhibitor compound 66
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-02-21 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 61 |
Unit cell lengths | 178.725, 178.725, 64.549 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 * - 2.000 |
R-factor | 0.194 * |
Rwork | 0.195 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jcq |
RMSD bond length | 0.006 |
RMSD bond angle | 1.181 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 * | 2.130 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.090 * | 0.247 * |
Total number of observations | 211060 * | |
Number of reflections | 75509 * | |
<I/σ(I)> | 9.3 | |
Completeness [%] | 94.7 * | 60 * |
Redundancy | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 17 * | PEG8K, NH4OAc, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 290K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium acetate | 200-400 (mM) | |
2 | 1 | reservoir | PEG8000 | 12-14 (%) | pH5.3-5.5 |
3 | 1 | drop | protein | 10 (mg/ml) |