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1KYV

Lumazine Synthase from S.pombe bound to riboflavin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]295
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths111.500, 145.523, 128.702
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution16.030 - 2.400
R-factor0.189
Rwork0.180
R-free0.21300

*

Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012

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RMSD bond angle1.750

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]16.0302.530
High resolution limit [Å]2.4002.400
Rmerge0.078

*

0.450

*

Number of reflections40966
Completeness [%]99.5

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99.5

*

Redundancy3.5

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7

*

295citrate, sodium formate, pH 5.2, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropenzyme10 (mg/ml)
21droppotassium phosphate20 (mM)pH7.0
31drop50 (mM)
41reservoircitrate0.1 (M)pH4.9-5.2
51reservoirsodium formate1.5 (M)

218853

PDB entries from 2024-04-24

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