Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1JYE

Structure of a Dimeric Lac Repressor with C-terminal Deletion and K84L Substitution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
DetectorBRANDEIS - B4
Spacegroup nameI 41 2 2
Unit cell lengths87.007, 87.007, 224.098
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution9.950 - 1.700
R-factor0.223

*

Rwork0.223
R-free0.24100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)lac repressor
RMSD bond length0.004
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]17.000
High resolution limit [Å]1.7001.700
Rmerge0.0630.089
Total number of observations258845

*

Number of reflections44403
<I/σ(I)>12.57.2
Completeness [%]93.172.7
Redundancy5.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6295Sodium Acetate, Sodium Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirsodium acetate1.3-1.5 (M)
21reservoirsodium citrate0.1 (M)

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon