1JYE
Structure of a Dimeric Lac Repressor with C-terminal Deletion and K84L Substitution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | BRANDEIS - B4 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 87.007, 87.007, 224.098 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 9.950 - 1.700 |
R-factor | 0.223 * |
Rwork | 0.223 |
R-free | 0.24100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | lac repressor |
RMSD bond length | 0.004 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 17.000 | |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.063 | 0.089 |
Total number of observations | 258845 * | |
Number of reflections | 44403 | |
<I/σ(I)> | 12.5 | 7.2 |
Completeness [%] | 93.1 | 72.7 |
Redundancy | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 295 | Sodium Acetate, Sodium Citrate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | sodium acetate | 1.3-1.5 (M) | |
2 | 1 | reservoir | sodium citrate | 0.1 (M) |