Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1IIK

CRYSTAL STRUCTURE OF THE TRANSTHYRETIN MUTANT TTR Y114C-DATA COLLECTED AT CRYO TEMPERATURE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsENRAF-NONIUS
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2000-10-30
DetectorMACSCIENCE
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths43.288, 85.288, 64.781
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.300

*

- 2.000
R-factor0.1969
Rwork0.192
R-free0.23900
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1f41
RMSD bond length0.009
RMSD bond angle1.260

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0770.272
Total number of observations102762

*

Number of reflections164111560

*

<I/σ(I)>9.54.1
Completeness [%]96.994.8
Redundancy3.93.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5

*

100

*

40% PEG 550 monomethyl ether, 0.1M sodium citrate, 0.1M ammonium sulphate, 0.1% BME, pH 5.0, VAPOR DIFFUSION, HANGING DROP at 298K, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein3 (mg/ml)
21dropTris50 (mM)pH7.5
31reservoirPEG550 MME36-40 (%)
41reservoirsodium citrate100 (mM)pH5.0
51reservoirammonium sulfate100 (mM)
61reservoirbeta-mercaptoethanol0.1 (%)

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon