1HPZ
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 108 |
Detector technology | CCD |
Collection date | 1997-01-28 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.91 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 223.100, 69.000, 104.000 |
Unit cell angles | 90.00, 106.80, 90.00 |
Refinement procedure
Resolution | 25.000 - 3.000 |
R-factor | 0.259 * |
Rwork | 0.254 |
R-free | 0.34300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hni |
RMSD bond length | 0.010 |
RMSD bond angle | 24.300 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (3.843) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.135 | 0.370 * |
Total number of observations | 195243 * | |
Number of reflections | 29927 | |
<I/σ(I)> | 7 | |
Completeness [%] | 97.7 | 94.2 * |
Redundancy | 6 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 * | 277 | Bis-Tris.propane, ammoniun sulfate, glycerol, PEG 8000, pH 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | NNRTI | 20 (mM) | |
10 | 1 | reservoir | PEG8000 | 9 (%(w/v)) | |
2 | 1 | drop | beta-OG | 5 (%(w/v)) | |
3 | 1 | drop | protein | 30 (mg/ml) | |
4 | 1 | drop | Tris-HCl | 10 (mM) | |
5 | 1 | drop | 75 (mM) | ||
6 | 1 | reservoir | bis-Tris-propane | 50 (mM) | |
7 | 1 | reservoir | ammonium sulfate | 100 (mM) | |
8 | 1 | reservoir | glycerol | 10 (%(w/v)) | |
9 | 1 | drop | DMSO |