Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1HDO

Human biliverdin IX beta reductase: NADP complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, Hamburg
BeamlineBW7B
Temperature [K]100
Collection date1999-11-15
Spacegroup nameP 21 21 21
Unit cell lengths40.000, 49.200, 106.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.150
R-factor0.124
R-free0.15800
Structure solution methodSIRAS
RMSD bond length0.015
RMSD bond angle0.032
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareSHARP
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.7001.210
High resolution limit [Å]1.1501.150
Rmerge0.0420.188
Total number of observations426976

*

Number of reflections75534
<I/σ(I)>11
Completeness [%]99.9100
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

6.530% PEG 3350, 0.2 M AMMONIUM SULFATE, 0.1 M SODIUM CACODYLATE PH 6.5, NADP TO ADDED TO A FINAL CONCENTRATION OF 2.5 MM
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein6.7 (mg/ml)
21dropNADP2.5 (mM)
31dropPEG80005 (%(w/v))
41dropammonium sulfate0.03 (M)
51dropsodium cacodylate0.02 (M)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon