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1H7H

The structure of CMP:2-keto-3-deoxy-manno-octonic acid synthetase and of its complexes with substrates and substrate analogues, CDP complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Temperature [K]297
Spacegroup nameP 1 21 1
Unit cell lengths46.170, 133.680, 48.490
Unit cell angles90.00, 102.45, 90.00
Refinement procedure
Resolution24.800 - 2.300
R-factor0.15
Rwork0.150
R-free0.20200
Structure solution methodOTHER
RMSD bond length0.006
RMSD bond angle1.300
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.800
High resolution limit [Å]2.3002.300

*

Rmerge0.056

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0.150

*

Number of reflections243182107

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Completeness [%]96.085

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Redundancy3.21.7

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

9.420

*

pH 9.40
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein8 (mg/ml)
21dropPEG200008 (%(w/v))
31dropTris-HCl50 (mM)
41dropcalcium acetate100 (mM)
51drop2.5 (mM)
61dropdithiothreitol1 (mM)
71reservoirPEG200002-4 (%)

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PDB entries from 2024-04-24

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