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1GY3

pCDK2/cyclin A in complex with MgADP, nitrate and peptide substrate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths150.710, 164.100, 72.430
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.700
R-factor0.25

*

Rwork0.250
R-free0.31300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1qmz
RMSD bond length0.020

*

RMSD bond angle2.000

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.810
High resolution limit [Å]2.7002.700
Rmerge0.1430.487
Total number of observations319218

*

Number of reflections45572
<I/σ(I)>4.21.5
Completeness [%]84.440.7
Redundancy7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

74

*

CRYSTALS WERE GROWN BY VAPOUR DIFFUSION AT 4C FROM SOLUTIONS CONTAINING 10 MG/ML PCDK2/CYCLIN A, 100 MM HEPES PH7.0, 2 MM SUBSTRATE PEPTIDE, 1MM ADP, 1.0 M LI2SO4. CRYSTALS WERE TRANSFERRED TO 20%PEG 8K, 100 MM HEPES PH 7.0, 10 MM SUBSSTRATE PEPTIDE, 5 MM MG(NO3)2
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11droppCDK2/cyclinA10 (mg/ml)
21dropHEPES100 (mM)pH7.0
31droppeptide2 (mM)
41dropADP1 (mM)
51drop1.05-1.15 (M)

218853

PDB entries from 2024-04-24

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