Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GNM

HIV-1 PROTEASE MUTANT WITH VAL 82 REPLACED BY ASP (V82D) COMPLEXED WITH U89360E (INHIBITOR)

Experimental procedure
Source typeROTATING ANODE
Source detailsSIEMENS
Detector technologyAREA DETECTOR
DetectorSIEMENS
Spacegroup nameP 61
Unit cell lengths63.170, 63.170, 83.800
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.000 - 2.300
R-factor0.175

*

Rwork0.175
RMSD bond length0.014
RMSD bond angle0.051
Data reduction softwareSAINT
Data scaling softwareSAINT
Phasing softwareCCP4
Refinement softwarePROLSQ
Data quality characteristics
 Overall
Low resolution limit [Å]100.000
High resolution limit [Å]2.300
Rmerge0.044
Completeness [%]92.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.8

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropinhibitor4.6 (mg/ml)
21dropdithiothreitol1 (mM)
31dropsodium acetate20 (mM)
41reservoirammonium sulfate20 (%)
51reservoirdimethyl sulfoxide10 (%)
61reservoirbeta-mercaptoethanol30 (mM)
71reservoir2-propanol4 (%)
81reservoirsodium phosphate/citric acid200 (mM)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon