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1G9M

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X4A
Synchrotron siteNSLS
BeamlineX4A
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-05-25
DetectorFUJI
Wavelength(s)0.97953
Spacegroup nameP 2 2 21
Unit cell lengths71.250, 88.110, 196.540
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.200
Rwork0.268
R-free0.32990
Structure solution methodTHIS DEPOSIT IS THE REFINEMENT OF THE PREVIOUSLY DETERMINED 1GC1 STRUCTURE
Starting model (for MR)1gc1
RMSD bond length0.007
RMSD bond angle26.200

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.1450.382
Number of reflections56183
<I/σ(I)>5.332.1
Completeness [%]87.766.3
Redundancy2.471.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.4293VAPOUR DIFFUSION CRYSTALLIZATION: 0.5 UL OF PROTEIN (~10MG/ML IN 350 MM NACL, 5 MM TRISCL PH 7.0) + 0.4 UL OF 0.1 M NACITRATE, 0.02 M NAHEPES, 10% ISOPROPANOL, 10.5% MONOMETHYL-PEG 5000, 0.0075% SEAPREP AGAROSE, PH 6.4 OVER A RESERVOIR OF 0.35 M NACL, 0.1 M NACITRATE, 0.02 M NAHEPES, 10% ISOPROPANOL, 10.5% MONOMETHYL-PEG 5000, PH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (mg/ml)
21drop350 (mM)
31dropTris-HCl5 (mM)
41reservoirsodium acetate0.5 (M)50 micro litter
51reservoirethanol95 (%)126 micro litter
61reservoir5 (M)45 micro litter

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