1FT2
CO-CRYSTAL STRUCTURE OF PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH A FARNESYL DIPHOSPHATE SUBSTRATE
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 96 |
Detector technology | IMAGE PLATE |
Collection date | 1998-04-27 |
Detector | RIGAKU |
Spacegroup name | P 65 |
Unit cell lengths | 166.660, 166.660, 98.820 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.000 - 3.400 |
R-factor | 0.219 |
Rwork | 0.219 |
R-free | 0.26800 |
Structure solution method | MOLECULAR REPLACEMENT USING 1FT1 COORDINATES |
Starting model (for MR) | 1ft1 |
RMSD bond length | 0.009 |
RMSD bond angle | 21.100 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 3.440 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.053 | 0.199 |
Total number of observations | 42609 * | |
Number of reflections | 17125 | |
<I/σ(I)> | 15 | 2.7 |
Completeness [%] | 79.4 | 58.1 * |
Redundancy | 2.5 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.7 * | 17 * | HANGING DROP, PROTEIN CONCENTRATION OF 16MG/ML IN 20 MM KCL, 10UM ZNCL, 10MM DTT, 20MM TRIS PH 7.7, 0.12% OCTYL-BETA-D-GLUCOPYRANOSIDE, AND 1MM FARNESYL DIPHOSPHATE; RESERVOIR SOLUTION OF 15% PEG 8000, 200MM AMMONIUM ACETATE, PH 7.0, vapor diffusion - hanging drop |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris-HCl | 20 (mM) | |
2 | 1 | drop | octyl-beta-D-glucopyranoside | 0.6 (%(w/v)) | |
3 | 1 | drop | FPP | 1 (mM) | |
4 | 1 | drop | FTase | 0.14 (mM) | |
5 | 1 | reservoir | PEG8000 | 15 (%(w/v)) | |
6 | 1 | reservoir | ammonium acetate | 200 (mM) | |
7 | 1 | reservoir | imidazole-malic acid | 100 (mM) | |
8 | 1 | reservoir | dithiothreitol | 10 (mM) |