1FH0
CRYSTAL STRUCTURE OF HUMAN CATHEPSIN V COMPLEXED WITH AN IRREVERSIBLE VINYL SULFONE INHIBITOR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2000-06-22 |
Detector | MARRESEARCH |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 104.700, 104.700, 179.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 1.600 |
R-factor | 0.197 * |
Rwork | 0.197 |
R-free | 0.21100 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.180 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | EPMR |
Refinement software | CNX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.038 | 0.424 |
Total number of observations | 386837 * | |
Number of reflections | 78054 | |
<I/σ(I)> | 37.3 | |
Completeness [%] | 98.1 | 89.9 |
Redundancy | 5 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 * | 17 * | Lithium sulfate, PEG 4000, tris, glycerol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 290.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | lithium sulfate | 0.17 (M) | |
2 | 1 | reservoir | Tris | 0.085 (M) | |
3 | 1 | reservoir | PEG4000 | 25.5 (%(w/v)) | |
4 | 1 | reservoir | glycerol | 15 (%(v/v)) | |
5 | 1 | drop | protein | 12 (mg/ml) | |
6 | 1 | drop | sodium acetate | 25 (mM) |