Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1E6Y

Methyl-coenzyme M reductase from Methanosarcina barkeri

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths113.678, 153.099, 153.288
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.600
R-factor0.16
Rwork0.160
R-free0.17900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mro
RMSD bond length0.005
RMSD bond angle25.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS (0.3)
Refinement softwareCNS (0.3)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.620
High resolution limit [Å]1.6001.600
Rmerge0.0590.259
Number of reflections326507
<I/σ(I)>16.25.3
Completeness [%]93.592.3
Redundancy2.72.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

714

*

pH 7.00
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein30 (mg/ml)
21dropTris-HCl10 (mM)
31reservoirmPEG500010 (%(w/v))
41reservoir2-propanol10 (%(w/v))
51reservoirammonium acetate0.2 (M)
61reservoirmagnesium acetate0.1 (M)
71reservoirglycerol20 (%(w/v))
81reservoirMES/KOH0.1 (M)

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon