Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DY1

Murine endostatin, crystal form III

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsELLIOTT GX-21
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date1998-09-15
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths37.210, 52.230, 96.450
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 2.200
R-factor0.195
Rwork0.195
R-free0.27000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1koe
RMSD bond length0.010
RMSD bond angle1.700
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]15.0002.320
High resolution limit [Å]2.2002.200
Rmerge0.1060.289
Total number of observations72598

*

Number of reflections9988
Completeness [%]99.397.9

*

Redundancy7.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.8

*

pH 8.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (mg/ml)
21dropsodium MOPS
31reservoirPEG400010 (%(w/v))
41reservoir300 (mM)
51reservoir10 (mM)
61reservoirTris-HCl100 (mM)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon