Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D1P

CRYSTAL STRUCTURE OF A YEAST LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (LTP1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]298
Detector technologyIMAGE PLATE
Collection date1995-11-12
DetectorRIGAKU RAXIS II
Spacegroup nameP 21 21 21
Unit cell lengths41.586, 67.647, 115.162
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution12.000 - 2.200
R-factor0.169
Rwork0.169
R-free0.23500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Bovine low molecular weight protein tyrosine phosphatase (BPTP) PDB ID: 1PNT
RMSD bond length0.013
RMSD bond angle1.680

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.280
High resolution limit [Å]2.2002.200
Rmerge0.0580.204
Total number of observations140622

*

Number of reflections15614
<I/σ(I)>25.97.28
Completeness [%]91.184.6
Redundancy92.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7298PEG 3400, HEPES, sodium chloride, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21reservoirPEG340018 (%)
31reservoir100 (mM)
41reservoirHEPES100 (mM)

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon