Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CKM

STRUCTURE OF TWO DIFFERENT CONFORMATIONS OF MRNA CAPPING ENZYME IN COMPLEX WITH GTP

Experimental procedure
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX7.2
Synchrotron siteSRS
BeamlinePX7.2
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1996-07
DetectorMAR scanner 300 mm plate
Spacegroup nameC 2 2 21
Unit cell lengths93.332, 214.931, 105.752
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.500
R-factor0.218
Rwork0.218
R-free0.29900
Structure solution methodMULTIPLE ISOMORPHOUS REPLACEMENT WITH A MERCURY DERIVATIVE OBTAINED BY SOAKING THE CRYSTAL FOR TWO HOURS IN 1 MM THIMEROSAL AND A SELENOMETHIONINE DERIVATIVE
RMSD bond length0.012
RMSD bond angle25.164

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.500
Rmerge0.062
Number of reflections36196
<I/σ(I)>13.3
Completeness [%]97.5
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

7.5Doherty, A.J., (1996) Nucl. Acids Res., 24. 2281.

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111clostripain2.5 (U/ml)
211Tris-HCl50 (mM)
3115 (mM)
411dithiothreitol5 (mM)
511glycerol10 (%)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon