1C6Y
ALTERNATE BINDING SITE FOR THE P1-P3 GROUP OF A CLASS OF POTENT HIV-1 PROTEASE INHIBITORS AS A RESULT OF CONCERTED STRUCTURAL CHANGE IN 80'S LOOP.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 58.440, 88.260, 42.940 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 8.000 - 2.500 |
| R-factor | 0.18 |
| Rwork | 0.180 |
| R-free | 0.31000 |
| RMSD bond length | 0.017 |
| RMSD bond angle | 2.100 |
| Refinement software | X-PLOR |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 * | 2.590 |
| High resolution limit [Å] | 2.500 * | 2.500 |
| Rmerge | 0.052 | 0.165 * |
| Total number of observations | 35099 * | |
| Number of reflections | 7254 | 676 * |
| Completeness [%] | 89.0 | 84 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | other * | 5 * | inhibitor-protein mixture and the reservoir solution were mixed in a 1:1(v/v) ratio * |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | enzyme | 4-6 (mg/ml) | |
| 2 | 1 | drop | MES | 10 (mM) | |
| 3 | 1 | drop | dithiothreitol | 1 (mM) | |
| 4 | 1 | drop | EDTA | 1 (mM) | |
| 5 | 1 | drop | 3 (mM) | ||
| 6 | 1 | drop | inhibitor | mixed with the protein containing buffer in a molar ratio of 1:3 to 1:5, with a final DMSO concentration of 2-5% | |
| 7 | 1 | reservoir | 0.6-0.8 (M) | ||
| 8 | 1 | reservoir | 0.1 (M) |






