1BPZ
HUMAN DNA POLYMERASE BETA COMPLEXED WITH NICKED DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1996-11-15 |
Detector | MARRESEARCH |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.535, 78.656, 54.618 |
Unit cell angles | 90.00, 107.54, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.600 |
R-factor | 0.243 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 9icj |
RMSD bond length | 0.020 |
RMSD bond angle | 3.000 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MERLOT |
Refinement software | TNT (5D) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.073 * | |
Total number of observations | 42489 * | |
Number of reflections | 14702 | |
Completeness [%] | 94.0 | 95.6 |
Redundancy | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 7 | used to seeding * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | DNA | 0.005ml | |
2 | 1 | 2 | PEG3350 | 17.5 (%) | |
3 | 1 | 2 | sodium acetate | 90 (mM) | |
4 | 1 | 2 | imidazol | 50 (mM) |