Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1AT6

HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH3R
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date1997-03
DetectorRIGAKU
Spacegroup nameP 43 21 2
Unit cell lengths76.660, 76.660, 38.290
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000

*

- 1.800
R-factor0.184
Rwork0.184
R-free0.23000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1lzb
RMSD bond length0.010
RMSD bond angle23.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR (3.843)
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.3001.860
High resolution limit [Å]1.8001.800
Rmerge0.0490.147
Total number of observations115484

*

Number of reflections10515
<I/σ(I)>39.67.1
Completeness [%]95.864.9
Redundancy115.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1unknown

*

7.54

*

CRYSTALS WERE PREPARED AT 277 K FROM THE DROPLET MIXTURE OF A 20 MG/ML PROTEIN SOLUTION CONTAINING 7 MM TRI-N-ACETYLCHITOTRIOSE (NAG3) AND 50 MM ACETATE BUFFER PH 4.2 WITH EQUAL VOLUME OF A RESERVOIR SOLUTION CONTAINING 2.0 M AMMONIUM FORMATE AND 100 MM N-(2-HYDROXYETHYL)PIPERAZINE-N'-(2-ETHANESULFONIC ACID) (HEPES) BUFFER PH 7.5. PRIOR TO THE DIFFRACTION DATA COLLECTION, THE CRYSTAL WAS SOAKED IN A CRYOPROTECTANT SOLUTION CONTAINING 30 % (W/V) POLYETHYLENE GLYCOL 20,000, 2.2 M AMMONIUM FORMATE, 100 MM HEPES BUFFER PH 7.5, AND 7 MM NAG3 FOR 2 MINUTES AT 277 K.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropNAG33.5 (mM)
31dropsodium acetate25 (mM)
41dropammonium formate1.0 (M)
51dropHEPES50 (mM)
61reservoirammonium formate2.0 (M)
71reservoirHEPES100 (mM)

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon