1AQD
HLA-DR1 (DRA, DRB1 0101) HUMAN CLASS II HISTOCOMPATIBILITY PROTEIN (EXTRACELLULAR DOMAIN) COMPLEXED WITH ENDOGENOUS PEPTIDE
Experimental procedure
| Source type | SYNCHROTRON |
| Source details | CHESS BEAMLINE F1 |
| Synchrotron site | CHESS |
| Beamline | F1 |
| Temperature [K] | 98 |
| Detector technology | IMAGE PLATE |
| Collection date | 1995-02 |
| Detector | FUJI |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 134.514, 134.320, 131.232 |
| Unit cell angles | 90.00, 104.82, 90.00 |
Refinement procedure
| Resolution | 6.000 - 2.450 |
| R-factor | 0.216 |
| Rwork | 0.216 |
| R-free | 0.27900 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1dlh |
| RMSD bond length | 0.016 |
| RMSD bond angle | 26.000 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | X-PLOR (3.1) |
| Refinement software | X-PLOR (3.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.570 |
| High resolution limit [Å] | 2.450 | 2.450 |
| Rmerge | 0.070 * | 0.331 * |
| Total number of observations | 157895 * | |
| Number of reflections | 73538 | 7700 * |
| <I/σ(I)> | 14.9 | 4.4 |
| Completeness [%] | 85.0 | 70 |
| Redundancy | 2.1 | 1.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | unknown * | 3.5 | CRYSTALS GREW AS NEEDLES FROM 10MG/ML HLA-DR1 / PEPTIDE COMPLEX, 15% PEG 4000, 100MM GLYCINE, PH 3.5, AT ROOM TEMPERATURE, OVER ONE WEEK. |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | 1 | protein | 10 (mg/ml) | |
| 2 | 1 | 1 | PEG4000 | 15 (%) | |
| 3 | 1 | 1 | glycine | 100 (mM) |






