1A2E
CRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA DECAMER CONTAINING A CISPLATIN INTERSTRAND CROSS-LINK ADDUCT
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LURE BEAMLINE DW21B |
Synchrotron site | LURE |
Beamline | DW21B |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-11-01 |
Detector | MARRESEARCH |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 42.890, 29.980, 46.570 |
Unit cell angles | 90.00, 95.98, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.630 |
R-factor | 0.1692 |
R-free | 0.20300 * |
Structure solution method | MAD |
RMSD bond length | 0.007 * |
RMSD bond angle | 0.016 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | SHARP |
Refinement software | SHELXL-96 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.130 | 1.720 |
High resolution limit [Å] | 1.630 | 1.630 |
Rmerge | 0.037 | 0.063 |
Total number of observations | 60517 * | |
Number of reflections | 7333 * | |
<I/σ(I)> | 6 | 12 |
Completeness [%] | 97.0 * | 91 |
Redundancy | 3.5 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6 * | 4 * | pH 6.20 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | DNA | 0.0825 (M) | |
2 | 1 | drop | sodium cacodylate | 20 (mM) | |
3 | 1 | drop | 5 (mM) | ||
4 | 1 | drop | 30 (mM) | ||
5 | 1 | drop | spermine | 2.5 (mM) | |
6 | 1 | drop | MPD | 2 (%(v/v)) | |
7 | 1 | reservoir | MPD |