1X9D
Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.99985 |
| Spacegroup name | P 1 |
| Unit cell lengths | 50.687, 53.878, 56.234 |
| Unit cell angles | 89.49, 63.60, 62.61 |
Refinement procedure
| Resolution | 48.800 - 1.410 |
| R-factor | 0.14598 |
| Rwork | 0.144 |
| R-free | 0.16200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1fmi |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.337 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | EPMR |
| Refinement software | REFMAC (refmac_5.2.0003) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.460 |
| High resolution limit [Å] | 1.410 | 3.040 | 1.410 |
| Rmerge | 0.102 | 0.098 | 0.129 |
| Total number of observations | 8274 | 8225 | |
| Number of reflections | 84600 | ||
| Completeness [%] | 95.5 | 93.3 | 93.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 6.5 | 298 | 24% PEG 4000, 50mM ammonium sulfate, 0.1M MES, 10% 1,4-butanediol, pH 6.5, vapor diffusion, temperature 298K |






