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1W2W

Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]110
Spacegroup nameP 21 21 21
Unit cell lengths60.620, 105.450, 263.050
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.750
R-factor0.174
Rwork0.174
R-free0.19800
Structure solution methodMAD
RMSD bond length0.008
RMSD bond angle1.218
Phasing softwareSOLVE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.870
High resolution limit [Å]1.7501.750
Rmerge0.0700.300
Number of reflections169966
<I/σ(I)>11.64.1
Completeness [%]99.698.9
Redundancy4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
12930.2 M AMMONIUM SULPHATE, 25 % PEG3350, 0.1 M BISTRIS, PH 5.5, 20 DEG C

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PDB entries from 2024-05-22

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