1VK2
Crystal structure of Uracil-DNA glycosylase (TM0511) from Thermotoga maritima at 1.90 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-03-03 |
Detector | ADSC |
Wavelength(s) | 1.0000, 0.9796, 0.9794 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 61.049, 61.049, 127.500 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.090 - 1.900 |
R-factor | 0.17886 |
Rwork | 0.177 |
R-free | 0.20573 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.671 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Number of reflections | 19816 | |
<I/σ(I)> | 25.15 | 2.03 |
Completeness [%] | 100.0 | 99.95 |
Redundancy | 7.87 | 6.13 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 8.5 | 277 | TRIS pH 8.5, 8% PEG-8000, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K. cryo condition: 25% PEG-200. |