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1UR5

Stabilization of a Tetrameric Malate Dehydrogenase by Introduction of a Disulfide Bridge at the Dimer/Dimer Interface

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM1A
Synchrotron siteESRF
BeamlineBM1A
Temperature [K]110
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 31 2 1
Unit cell lengths105.575, 105.575, 102.531
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution25.000 - 1.750
R-factor0.19
Rwork0.190
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1guy
RMSD bond length0.004

*

RMSD bond angle21.300

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]25.0001.810
High resolution limit [Å]1.7501.750
Rmerge0.1290.457
Total number of observations674394

*

Number of reflections66684
<I/σ(I)>22.84.6
Completeness [%]96.689
Redundancy10.1

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

4.5288

*

15% PEG400, 100MM NAAC, PH 4.5, 40MM CD2+
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein15 (mg/ml)
21reservoirPEG40015 (%)
31reservoirsodium acetate100 (mM)pH4.5
41reservoir40 (mM)

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PDB entries from 2024-05-15

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