1T64
Crystal Structure of human HDAC8 complexed with Trichostatin A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.3 |
| Synchrotron site | ALS |
| Beamline | 5.0.3 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2001-02-20 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 43 |
| Unit cell lengths | 81.014, 81.014, 114.178 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 81.650 - 1.900 |
| R-factor | 0.172 |
| Rwork | 0.172 |
| R-free | 0.22087 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1c3r |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.272 |
| Data reduction software | HKL-2000 |
| Data scaling software | SCALEPACK |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.1.24) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 81.000 | 1.950 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.058 | 0.540 |
| Number of reflections | 54547 | |
| <I/σ(I)> | 23.8 | 2.5 |
| Completeness [%] | 99.3 | 99 |
| Redundancy | 4.5 | 3.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.7 | 277 | PEG 8000, calcium acetate, imidazole, pH 6.7, VAPOR DIFFUSION, SITTING DROP, temperature 277K |
