1S5O
Structural and Mutational Characterization of L-carnitine Binding to Human carnitine Acetyltransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9504 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 137.560, 84.650, 57.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.189 |
Rwork | 0.189 |
R-free | 0.22300 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nm8 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.300 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.086 * | 0.343 * |
Number of reflections | 58948 | |
<I/σ(I)> | 4.12 | |
Completeness [%] | 91.6 | 83.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6.2 | 295 | Bis-Tris, NaCl, PEG8000, L-Carnitine, hpCAT, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | drop | L-carnitine | 1 (mM) | |
3 | 1 | reservoir | Bis-Tris | 50 (mM) | pH6.2 |
4 | 1 | reservoir | 100 (mM) | ||
5 | 1 | reservoir | PEG8000 | 12-15 (%) |