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1S4D

Crystal Structure Analysis of the S-adenosyl-L-methionine dependent uroporphyrinogen-III C-methyltransferase SUMT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX14.2
Synchrotron siteSRS
BeamlinePX14.2
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)0.978
Spacegroup nameI 4
Unit cell lengths218.097, 218.097, 190.341
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.840 - 2.700
R-factor0.21526
Rwork0.213
R-free0.26032
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1pjq
RMSD bond length0.012
RMSD bond angle1.744
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.8402.800
High resolution limit [Å]2.7002.700
Rmerge0.0570.416
Number of reflections121731
<I/σ(I)>19.523.27
Completeness [%]100.0100
Redundancy7.77.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6290PEG 20000, sodium citrate, lithium sulfate, pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 290K

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PDB entries from 2024-05-15

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