Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1RD3

2.5A Structure of Anticoagulant Thrombin Variant E217K

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSRS BEAMLINE PX14.2
Synchrotron siteSRS
BeamlinePX14.2
Temperature [K]100
Detector technologyCCD
Collection date2003-10-10
DetectorADSC QUANTUM 4
Wavelength(s)0.9795
Spacegroup nameP 21 21 21
Unit cell lengths73.230, 107.620, 136.030
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.360 - 2.500
Rwork0.229
R-free0.25900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1doj
RMSD bond length0.007
RMSD bond angle1.500
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareMOLREP
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.5402.670
High resolution limit [Å]2.5002.500
Rmerge0.1420.633
Number of reflections36929
<I/σ(I)>4.71.5
Completeness [%]99.989.3
Redundancy9.22.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.4295sodium tris, potassium phosphate, glycerol, PEG 8000, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon