1RD3
2.5A Structure of Anticoagulant Thrombin Variant E217K
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX14.2 |
Synchrotron site | SRS |
Beamline | PX14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-10-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.230, 107.620, 136.030 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.360 - 2.500 |
Rwork | 0.229 |
R-free | 0.25900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1doj |
RMSD bond length | 0.007 |
RMSD bond angle | 1.500 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.540 | 2.670 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.142 | 0.633 |
Number of reflections | 36929 | |
<I/σ(I)> | 4.7 | 1.5 |
Completeness [%] | 99.9 | 89.3 |
Redundancy | 9.2 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 295 | sodium tris, potassium phosphate, glycerol, PEG 8000, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 295K |