1P7T
Structure of Escherichia coli malate synthase G:pyruvate:acetyl-Coenzyme A abortive ternary complex at 1.95 angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-25 |
Detector | MARRESEARCH |
Wavelength(s) | 1.008 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.931, 107.394, 204.974 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.220 - 1.950 |
R-factor | 0.197 |
Rwork | 0.194 |
R-free | 0.29400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1d8c |
RMSD bond length | 0.022 * |
RMSD bond angle | 2.700 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | EPMR |
Refinement software | TNT |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.220 | 2.060 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.051 * | 0.212 * |
Total number of observations | 591192 * | |
Number of reflections | 108075 * | |
Completeness [%] | 90.3 | 90.3 |
Redundancy | 3.3 * | 3.3 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.9 | 298 | MgCl2, Tris, DTT, pyruvate, acetyl-Coenzyme A, HEPES, PEG-8000, sodium acetate, pH 7.9, VAPOR DIFFUSION, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 27.7 (mg/ml) | |
10 | 1 | reservoir | PEG8000 | 16 (%) | |
2 | 1 | drop | 8.3 (mM) | ||
3 | 1 | drop | Tris | 8.3 (mM) | pH7.9 |
4 | 1 | drop | dithiothreitol | 4.2 (mM) | |
5 | 1 | drop | pyruvate | 50 (mM) | |
6 | 1 | drop | acetyl-CoA | 4.2 (mM) | |
7 | 1 | reservoir | HEPES | 50 (mM) | pH7.0 |
8 | 1 | reservoir | sodium acetate | 150 (mM) | |
9 | 1 | reservoir | 5 (mM) |