Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1O0V

The crystal structure of IgE Fc reveals an asymmetrically bent conformation

Replaces:  1LS0
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12C
Synchrotron siteNSLS
BeamlineX12C
Temperature [K]100
Detector technologyCCD
Collection date2000-10-24
DetectorBRANDEIS - B4
Wavelength(s)1.1
Spacegroup nameP 21 21 2
Unit cell lengths129.310, 74.830, 78.650
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.000 - 2.600
Rwork0.218
R-free0.29700
Structure solution methodMAD
RMSD bond length0.008
RMSD bond angle25.954

*

Data reduction softwareDENZO
Data scaling softwareSCALA
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]54.0002.670
High resolution limit [Å]2.6002.600
Rmerge0.0630.387
Number of reflections24126
<I/σ(I)>8.82
Completeness [%]99.899.5
Redundancy6.35.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

8.529542.5% saturated ammonium sulphate, 100mM Tris ph 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein2 (mg/ml)
21dropTris-HCl50 (mM)pH8.5
31drop10 (mM)
41dropsodium azide0.05 (%)
51reservoirTris-HCl100 (mM)pH8.5
61reservoirammonium sulfate40-45 (%)
71reservoirsodium azide0.1 (%)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon