1LTX
Structure of Rab Escort Protein-1 in complex with Rab geranylgeranyl transferase and isoprenoid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9393 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.700, 197.300, 85.300 |
Unit cell angles | 90.00, 112.80, 90.00 |
Refinement procedure
Resolution | 19.740 - 2.800 * |
R-factor | 0.224 |
Rwork | 0.224 |
R-free | 0.27400 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dce |
RMSD bond length | 0.007 * |
RMSD bond angle | 1.280 * |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.700 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.094 * | 0.364 * |
Number of reflections | 54362 | 3716 * |
<I/σ(I)> | 9.5 | 3.25 |
Completeness [%] | 94.5 | 62.5 |
Redundancy | 3.6 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.2 | 298 | used microseeding, Rak, A., (2001) J.STRUCT.BIOL., 136, 158. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 15 (mg/ml) | |
2 | 1 | reservoir | PEG3350 | 20 (%) | |
3 | 1 | reservoir | KSCN | 100 (mM) | |
4 | 1 | reservoir | Namalonate | 100 (mM) |