1LM5
Structures of two intermediate filament-binding fragments of desmoplakin reveal a unique repeat motif structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-11-15 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.925 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.320, 95.379, 54.982 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.000 * - 1.800 |
R-factor | 0.203 |
Rwork | 0.203 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.420 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 * | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.031 * | 0.300 * |
Total number of observations | 292583 * | |
Number of reflections | 32732 * | |
Completeness [%] | 96.1 | 90.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 20 * | PEG 4000, magnesium chloride, acetate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 30 (mg/ml) | |
2 | 1 | reservoir | sodium acetate | 100 (mM) | pH5.2 |
3 | 1 | reservoir | PEG4000 | 31 (%(w/v)) | |
4 | 1 | reservoir | 150 (mM) |