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1KC2

structure of the triple (Lys(beta)D3Ala, Asp(beta)C8Ala, AspCD2Ala) mutant of the Src SH2 domain bound to the PQpYEEIPI peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Spacegroup nameI 4 2 2
Unit cell lengths62.447, 62.447, 133.680
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000

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- 2.100
R-factor0.229
Rwork0.229
R-free0.26900

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Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle24.500

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000

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High resolution limit [Å]2.100

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2.100

*

Rmerge0.051

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0.153

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Total number of observations166051

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Number of reflections8048

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Completeness [%]98.4

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97.9

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein70 (mg/ml)
21reservoirammonium sulfate1.8 (M)
31reservoirMES0.1 (M)pH6.0
41reservoir0.1 (M)

246031

PDB entries from 2025-12-10

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