1JX7
Crystal structure of ychN protein from E.coli
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-09-09 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97949, 0.97926, 0.99999 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.210, 80.460, 140.150 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.800 |
R-factor | 0.229 |
Rwork | 0.229 |
R-free | 0.24900 * |
Structure solution method | MAD |
RMSD bond length | 0.008 * |
RMSD bond angle | 1.400 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.100 | |
High resolution limit [Å] | 2.800 | 2.800 * |
Rmerge | 0.106 * | 0.325 * |
Number of reflections | 35268 * | 1756 * |
Completeness [%] | 97.3 | 98.6 * |
Redundancy | 3.07 * | 2.93 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 21.5-22.5 * | AMS, pH 5.5, VAPOR DIFFUSION, HANGING DROP at 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 250 (mg/ml) | |
2 | 1 | drop | Tris-HCl | 50 (mM) | pH7.2 |
3 | 1 | drop | 150 (mM) | ||
4 | 1 | drop | ammonium phosphate | 2.4 (M) | |
5 | 1 | drop | citric acid | 0.1 (M) | pH5.5 |
6 | 1 | reservoir | ammonium phosphate | 2.4 (M) | |
7 | 1 | reservoir | citric acid | 0.1 (M) | pH5.5 |