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1JX7

Crystal structure of ychN protein from E.coli

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2000-09-09
DetectorADSC QUANTUM 4
Wavelength(s)0.97949, 0.97926, 0.99999
Spacegroup nameP 21 21 21
Unit cell lengths66.210, 80.460, 140.150
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000

*

- 2.800
R-factor0.229
Rwork0.229
R-free0.24900

*

Structure solution methodMAD
RMSD bond length0.008

*

RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]70.100
High resolution limit [Å]2.8002.800

*

Rmerge0.106

*

0.325

*

Number of reflections35268

*

1756

*

Completeness [%]97.398.6

*

Redundancy3.07

*

2.93

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.521.5-22.5

*

AMS, pH 5.5, VAPOR DIFFUSION, HANGING DROP at 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein250 (mg/ml)
21dropTris-HCl50 (mM)pH7.2
31drop150 (mM)
41dropammonium phosphate2.4 (M)
51dropcitric acid0.1 (M)pH5.5
61reservoirammonium phosphate2.4 (M)
71reservoircitric acid0.1 (M)pH5.5

229380

PDB entries from 2024-12-25

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