Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

12E8

2E8 FAB FRAGMENT

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RUH2R
Temperature [K]125
Detector technologyAREA DETECTOR
Collection date1996-05
DetectorADSC
Spacegroup nameP 1 21 1
Unit cell lengths66.560, 65.570, 103.220
Unit cell angles90.00, 97.04, 90.00
Refinement procedure
Resolution20.000 - 1.900
R-factor0.221
Rwork0.221
R-free0.27100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)PDB ENTRIES 6FAB AND 1FLR
RMSD bond length0.011
RMSD bond angle28.400

*

Data reduction softwareUCSD (DATA PROCESSING SOFTWARE)
Data scaling softwareUCSD
Phasing softwareX-PLOR (3.851)
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]2.000
High resolution limit [Å]1.8501.850
Rmerge0.0850.390
Total number of observations237795

*

Number of reflections63078
<I/σ(I)>61.6
Completeness [%]84.082
Redundancy3.82.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.623% PEG 4000 (W/V), 0.10 M SODIUM CITRATE, AND 0.2 M AMMONIUM ACETATE (PH 5.6). CRYSTALS (0.2 X 0.2 X 0.5 MM) WERE OBTAINED IN 4-6 WEEKS.
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4 (mg/ml)
21reservoirPEG400023 (%(w/v))
31reservoirsodium citrate0.10 (M)
41reservoirammonium acetate0.2 (M)pH5.6

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon